FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004858511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004858511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21650015
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA413910.19118231557807233No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT318120.14693754253749938No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGTATAGGATCTCGTAT241970.11176435674524936TruSeq Adapter, Index 22 (97% over 37bp)
CGGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGC237540.10971816878648814No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG219300.10129323236034708No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)