FastQCFastQC Report
Sat 2 Jul 2022
EGAF00004858534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004858534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79503712
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT2024580.254652260764881No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC943400.1186611261622602No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG870320.1094691025244205No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)