FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004858564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004858564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58991671
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCAT1276550.21639495514544754No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC696970.11814718725292593No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG672580.11401270528512407No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)