Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004858641 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 45492225 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA | 252861 | 0.5558334418683631 | TruSeq Adapter, Index 16 (97% over 40bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA | 98458 | 0.21642819185036566 | TruSeq Adapter, Index 16 (97% over 40bp) |
CGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATGCCG | 72072 | 0.1584270718787661 | TruSeq Adapter, Index 16 (97% over 40bp) |