Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004858742 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29209695 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATCA | 4045 | 0.0 | 32.23981 | 50 |
GCCGTAT | 4725 | 0.0 | 28.037958 | 48 |
CGCCGTA | 4975 | 0.0 | 27.32248 | 47 |
GCGTCGT | 5300 | 0.0 | 26.883785 | 12 |
CCGTATC | 6185 | 0.0 | 22.144634 | 49 |
TGGTCGC | 6065 | 0.0 | 20.875702 | 43 |
AGAGCGT | 7300 | 0.0 | 20.227194 | 9 |
GATCGGA | 7555 | 0.0 | 19.729265 | 2 |
GTCGCCG | 6980 | 0.0 | 19.078215 | 45 |
AGCGTCG | 7800 | 0.0 | 18.576704 | 11 |
GTAGATC | 7970 | 0.0 | 18.483124 | 32 |
GTCGTGT | 8140 | 0.0 | 18.307327 | 14 |
CGTGTAG | 8085 | 0.0 | 18.261045 | 16 |
TCGTGTA | 8055 | 0.0 | 18.200676 | 15 |
TCGCCGT | 7185 | 0.0 | 18.054192 | 46 |
GGTCGCC | 7600 | 0.0 | 17.703375 | 44 |
TATCGCG | 675 | 0.0 | 17.376621 | 22 |
GTATCAT | 8120 | 0.0 | 17.037449 | 51 |
ATCGGAA | 8880 | 0.0 | 16.940792 | 3 |
CGTCGTG | 8880 | 0.0 | 16.782207 | 13 |