Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004859024 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24492783 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATCGCG | 1855 | 0.0 | 14.88273 | 22 |
CGTATCA | 1670 | 0.0 | 13.84356 | 50 |
GTCGCTA | 2250 | 0.0 | 12.730967 | 27 |
GCGGTAT | 4360 | 0.0 | 12.66211 | 1 |
CGACCTA | 2125 | 0.0 | 12.3411 | 4 |
GCGTCGT | 2005 | 0.0 | 11.871125 | 12 |
CGTATCG | 2655 | 0.0 | 11.82704 | 3 |
TTACGCG | 1195 | 0.0 | 11.541331 | 54 |
CCCGTAT | 2720 | 0.0 | 11.036285 | 1 |
ATCGAAG | 5295 | 0.0 | 10.688048 | 6 |
GTATCGA | 2245 | 0.0 | 10.60552 | 4 |
CGGTATA | 1960 | 0.0 | 10.563151 | 2 |
CCGACAT | 5350 | 0.0 | 10.383522 | 1 |
CGCGATT | 1015 | 0.0 | 10.194008 | 17 |
CGCGTAA | 1235 | 0.0 | 10.057919 | 1 |
ATTCGCG | 1115 | 0.0 | 9.899489 | 14 |
ATATCGC | 2875 | 0.0 | 9.84248 | 21 |
CGCTAAT | 1310 | 0.0 | 9.746033 | 20 |
CGTTCGC | 1710 | 0.0 | 9.681328 | 16 |
CGACATC | 5225 | 0.0 | 9.57591 | 2 |