Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004859376 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28237343 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATCGCG | 825 | 0.0 | 16.854527 | 22 |
CGTATCA | 2375 | 0.0 | 14.289635 | 50 |
GCGTCGT | 2665 | 0.0 | 13.870152 | 12 |
TTACGCG | 1595 | 0.0 | 13.830438 | 54 |
GCGGTAT | 4485 | 0.0 | 12.987516 | 1 |
ATCGAAG | 5570 | 0.0 | 11.978443 | 6 |
TACGCGA | 1945 | 0.0 | 11.515401 | 55 |
CGTATCG | 2790 | 0.0 | 11.410172 | 3 |
CCGACAT | 4270 | 0.0 | 11.341442 | 1 |
GTATCGA | 2495 | 0.0 | 11.1309595 | 4 |
GTCGCTA | 2350 | 0.0 | 11.113347 | 27 |
CGCCGTA | 3255 | 0.0 | 11.051597 | 47 |
GATCGGA | 3475 | 0.0 | 11.012659 | 2 |
TTACACG | 2945 | 0.0 | 10.825166 | 32 |
CGGTATA | 1950 | 0.0 | 10.767767 | 2 |
GCCGTAT | 3170 | 0.0 | 10.4918375 | 48 |
CGCGTAA | 2415 | 0.0 | 9.956377 | 1 |
CTCGGAT | 5935 | 0.0 | 9.871553 | 1 |
ACGCGAC | 2210 | 0.0 | 9.827573 | 56 |
CGCGAAT | 1180 | 0.0 | 9.757915 | 1 |