Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004859378 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 39078265 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATCA | 4935 | 0.0 | 17.733387 | 50 |
GCCGTAT | 5350 | 0.0 | 16.227257 | 48 |
CGCCGTA | 5770 | 0.0 | 15.28871 | 47 |
GTCGCCG | 6280 | 0.0 | 13.933699 | 45 |
GCGTCGT | 6465 | 0.0 | 13.695731 | 12 |
CGTATCG | 3105 | 0.0 | 11.833377 | 3 |
CCCGTAT | 4235 | 0.0 | 11.815617 | 1 |
CCGTATC | 7720 | 0.0 | 11.744143 | 49 |
TGGTCGC | 7460 | 0.0 | 11.401131 | 43 |
TCGCCGT | 7905 | 0.0 | 11.379302 | 46 |
GATCGGA | 7995 | 0.0 | 11.204615 | 2 |
AGCGTCG | 8245 | 0.0 | 10.823861 | 11 |
AGAGCGT | 9035 | 0.0 | 10.109378 | 9 |
GTATCGA | 4030 | 0.0 | 10.072449 | 4 |
GGTCGCC | 8800 | 0.0 | 9.823981 | 44 |
CGACCTA | 2890 | 0.0 | 9.686665 | 4 |
CGTTCGC | 2575 | 0.0 | 9.650244 | 16 |
AGATCGG | 9090 | 0.0 | 9.546883 | 1 |
CTCGGGT | 8075 | 0.0 | 9.4902 | 1 |
CTCGGAT | 8935 | 0.0 | 9.360027 | 1 |