Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004890182 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25529237 |
Sequences flagged as poor quality | 0 |
Sequence length | 65 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 3275 | 0.0 | 42.877254 | 48 |
TCGTATG | 3485 | 0.0 | 40.544956 | 45 |
CGTATGC | 3835 | 0.0 | 37.075542 | 46 |
TCCGTAT | 4265 | 0.0 | 32.714817 | 37 |
CTCGTAT | 4335 | 0.0 | 32.390694 | 44 |
TATCTCG | 4780 | 0.0 | 29.25239 | 41 |
CGTATCT | 5065 | 0.0 | 28.07233 | 39 |
GTTCCGT | 5290 | 0.0 | 26.70978 | 35 |
GATCGGA | 5505 | 0.0 | 25.70604 | 1 |
GTATGCC | 5520 | 0.0 | 25.492395 | 47 |
CGTCTGA | 5575 | 0.0 | 25.449873 | 16 |
TTCCGTA | 5755 | 0.0 | 24.346626 | 36 |
ACGTCTG | 5970 | 0.0 | 23.864822 | 15 |
ACACGTC | 6200 | 0.0 | 23.074669 | 13 |
CCGTATC | 6590 | 0.0 | 21.531317 | 38 |
TCTCGTA | 6730 | 0.0 | 21.171078 | 43 |
CACGTCT | 6980 | 0.0 | 20.707422 | 14 |
AGTTCCG | 7015 | 0.0 | 20.47796 | 34 |
TCGGAAG | 7360 | 0.0 | 19.479807 | 3 |
ATCTCGT | 7565 | 0.0 | 18.79529 | 42 |