FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004896259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004896259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82872620
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG118600.011.812416140-144
GATCGGA82000.011.343034140-144
TAGATCG71700.09.438202140-144
ATCGGAA107250.05.195463140-144
Produced by FastQC (version 0.11.5)