FastQCFastQC Report
Tue 5 Jul 2022
EGAF00004896920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004896920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491432729
Sequences flagged as poor quality0
Sequence length151
%GC26

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGCCATAAATTACAACATCCATCTCAAAAAAATCACCAACAATAACC8782090.17870380790205773No Hit
GGGGCCATAAATTACAACATCCATCTCAAAAAAATCACCAACAATAACCA6199430.126150124608408No Hit
GGGGACCATAAATTACAACATCCATCTCAAAAAAATCACCAACAATAACC5206400.10594328974780189No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)