FastQCFastQC Report
Tue 27 Dec 2022
EGAF00004896921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004896921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465705974
Sequences flagged as poor quality0
Sequence length151
%GC27

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATAATGGTGAGGTGTTTATTTTGAAGGAGTTGTTAGTGATAATTGGAGT38961810.8366182135340183No Hit
TATAATGGTGATGAATTGTTTGTGTTTATTTTGTGTGTATGTGTAGGAAA27826460.5975113387744517No Hit
TATAATGGTGAGTATGTTGGATTTTGTAGGATATTTTTGTTTTTTTGTTT10199590.2190135100135091No Hit
TATAATGGTGAGTATGTTGGATTTTGTGGGATATTTTTGTTTTTTTGTTT5852170.12566233475029462No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)