EGAF00004898014 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004898014
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2021651
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGC	11843	0.5858083319029842	No Hit
GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGAT	5715	0.28268974219585874	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	4725	0.2337198655950013	No Hit
GGTCTATACCCTGCAACTTAACGCCCAGTTAAGACTCGGTTTCCCTTCGG	4046	0.20013345527986778	No Hit
GTATACGTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGT	3785	0.1872232150850963	No Hit
ATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTC	3444	0.17035581314480097	No Hit
GACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGG	3319	0.16417274791741995	No Hit
TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	3258	0.16115541208645806	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3129	0.15477448877180086	No Hit
GTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGG	2846	0.1407760290970103	No Hit
GTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGG	2782	0.13761029970059124	No Hit
CGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGC	2502	0.12376023359125783	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT	2429	0.12014932349846735	No Hit
GTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCGCAAG	2241	0.11084999339648634	No Hit
GGGCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGA	2095	0.10362817321090535	No Hit
CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAG	2040	0.10090762451085772	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	10595	79.92261	1
GGTATCA	5260	78.83845	1
TATCAAC	15805	53.84063	2
AACGCAG	15860	53.700607	6
ACGCAGA	15990	52.994095	7
CGCAGAG	16155	52.05467	8
GCAGAGT	16260	51.541553	9
ATCAACG	16680	50.974396	3
CAACGCA	16915	50.223682	5
TCAACGC	17095	49.77901	4
CTGTGCA	5200	48.419113	9
ACTGTGC	5710	47.999977	8
CACTGTG	5360	47.642467	7
GCACTGT	6295	40.794643	6
ACACAGC	6145	40.584885	1
ACAGCAC	6740	38.421406	3
AGCACTG	6800	38.39975	5
GGTCTAT	2120	34.53928	1
TCTATAC	2525	33.331524	3
GTCTATA	2305	32.455055	2