EGAF00004898025 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004898025
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3078823
Sequences flagged as poor quality	0
Sequence length	150
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14520	0.4716087933603198	No Hit
TGAAATACAGAGAAAAAGGCATCCCAAAAAAAAAAAAAAAAAAAAAAAAA	8713	0.2829977559606382	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7342	0.23846775212475677	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7270	0.23612919612462294	No Hit
TCATAAAAAGGTCAATCCAACCACCCAAAAAAAAAAAAAAAAAAAAAAAA	4902	0.1592166876757774	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	4193	0.13618840706334856	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	3495	0.11351740583982906	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3299	0.10715133672835365	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	3259	0.10585213895050155	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACAGAGA	3665	81.71412	7
GTATCAA	21435	71.69889	1
CAGAGAA	4210	70.79392	8
AAAGGTC	2470	69.07631	7
TGAAATA	5335	66.309944	1
AATACAG	4875	66.01121	4
GAAATAC	5435	64.64161	2
AAATACA	5000	63.49702	3
AGAGAAA	4750	62.442654	9
TACAGAG	5210	58.173084	6
TAAAAAG	3310	56.767178	4
GGTATCA	12810	56.54205	1
TCATAAA	4070	56.453064	1
CATGTAA	960	53.245014	2
AGGTCAA	3235	51.40619	9
AAGGTCA	3395	49.407616	8
TATCAAC	31230	49.24035	2
ATACAGA	6540	47.883865	5
ATCAACG	32435	47.03291	3
CAACGCA	32660	46.642006	5