EGAF00004898039 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004898039
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9238556
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67718	0.7329933379199087	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31270	0.33847280895412657	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30232	0.3272372868660427	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20349	0.22026169457651174	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	15386	0.1665411780802108	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	10624	0.11499632626570647	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	10508	0.1137407187876547	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	10175	0.11013625938945436	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	9455	82.22035	1
GTATCAA	28155	68.3203	1
ATCAACG	36005	53.588497	3
CAACGCA	36340	53.15967	5
TCAACGC	36550	52.82198	4
AACGCAG	38625	49.97374	6
CGCAGAG	41225	46.834114	8
ACGCAGA	41255	46.756817	7
TATCAAC	44220	43.794933	2
GCAGAGT	44205	43.730686	9
GTACTTT	66155	36.44007	1
GCAGCGC	1195	35.328983	8
ACTTTTT	75285	32.525646	3
TACTTTT	76805	31.828089	2
TCTGTCG	1290	30.4225	8
AGAGTAC	49295	30.313097	10-11
GCTCTAG	1925	29.971348	1
GTCTCGC	1215	29.861998	1
TGGTCCT	3620	29.574343	5
CCGTATG	1165	29.093075	9