EGAF00004898070 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004898070
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6954938
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	14157	0.20355321643413643	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	11847	0.17033940489476687	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	10409	0.14966344775467444	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	9519	0.13686678443431127	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	8103	0.11650714930887954	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	7224	0.10386864699584669	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	7018	0.10090672267675141	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCAGCGC	1275	55.995167	8
GGTATCA	2520	49.854977	1
TGCAGCG	1560	45.764954	7
CAACGCA	5955	43.68186	5
ATCAACG	6345	41.27837	3
CGCAGAG	6300	41.26866	8
GCTCTAG	1280	40.935425	1
ACGCAGA	6520	40.149624	7
TCAACGC	6510	39.957836	4
GTATCAA	7090	38.463238	1
TGGTCCT	2915	37.777626	5
GCAGAGT	7345	35.236233	9
AACGCAG	7565	34.680157	6
GTCTCGC	825	34.64287	1
TCTGTCG	780	33.561207	8
CATGCAG	2325	32.51489	5
ACGGGAC	800	31.994843	3
TCTCGCT	935	31.195068	2
CTCGCTC	880	31.115492	3
GCCTTTC	4880	27.918499	7