EGAF00004898076 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004898076
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4095920
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15324	0.37412840094533095	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8542	0.2085489950975605	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7227	0.17644387585695034	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	6642	0.16216137033926442	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	5835	0.14245883708666185	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	5746	0.14028594308482586	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	5400	0.1318385124709467	No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTAT	4651	0.11355202250043946	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4496	0.10976776890173635	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	4318	0.10542198089806441	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	25355	69.06626	1
GGTATCA	16295	52.862152	1
CAACGCA	36725	47.75388	5
TATCAAC	37370	47.141575	2
ATCAACG	38435	45.53618	3
AACGCAG	38795	45.09396	6
CGCAGAG	38960	44.995926	8
ACGCAGA	39915	43.955967	7
TCAACGC	40020	43.822117	4
GCAGAGT	40420	43.10347	9
ATTTAGG	3200	35.724335	1
TTTAGGG	3530	32.019764	2
CTATTGA	3640	30.06321	9
ATTCTCT	2020	28.86832	6
TATTCTC	2075	28.797392	5
ACTGTGC	2255	28.414278	8
TCTCTGC	2110	26.613707	8
TTCTCTG	2555	26.487162	7
TAGTACT	1745	26.404486	4
TACTGTG	1760	26.179768	7