EGAF00004898101 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004898101
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7511038
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	51100	0.6803320659541331	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34689	0.46184029424428424	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28076	0.3737965378420399	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17652	0.2350141218830207	No Hit
GTCCCAACCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG	14351	0.1910654692467273	No Hit
GTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGG	10618	0.1413652813366142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCCCAA	6015	52.83735	1
GTATCAA	33410	52.408485	1
GGTATCA	21885	50.174747	1
TATCCTC	5750	48.855057	1
CCAACCA	7475	42.828346	4
TCCCAAC	7800	42.798492	2
CCAGGAC	7790	41.62458	8
CAACGCA	44075	41.15069	5
ATCAACG	44785	40.68486	3
TCAACGC	44830	40.68384	4
AACGCAG	44915	40.4679	6
TATCAAC	45270	40.222694	2
GTCTCGC	2165	38.486248	1
ACGCAGA	48185	37.672215	7
CGCAGAG	48505	37.39915	8
GCAGAGT	51175	35.494633	9
ACCAGGA	9295	35.26899	7
TATCACG	625	35.227505	2
TCTGTCG	2545	34.36532	8
TCTCGCT	2480	32.872227	2