EGAF00004898177 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004898177
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2648794
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27786	1.0490056984423854	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17655	0.6665297490103043	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17081	0.6448595096485419	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	4397	0.16600007399593927	No Hit
TTCTCATTCTTCCTTCCTGTCTTGCTACCCTCACAGCCTCATCCAAAAGA	3878	0.14640625129776041	No Hit
TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCT	3805	0.1436502800897314	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3784	0.14285746645454497	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3741	0.14123408615392513	No Hit
GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAAT	3555	0.1342120225279882	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3006	0.11348560892240014	No Hit
GTATCAACGCAGAGTACATGGGAAAGAGTGTCGTATATCTGTCTCTTATA	2786	0.10517994226806615	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCTAC	1605	60.408737	1
TATACGA	1535	53.863388	2
ATCTACA	2165	50.55302	2
ATATACG	1630	47.804737	1
TCTACAC	2580	47.263012	3
ATACGAC	1785	46.319492	3
GTATCAA	37495	45.95813	1
TACACGA	830	45.149162	5
GACACTC	1865	44.01283	7
GGTATCA	22865	43.4963	1
TTATCAA	2475	38.69349	1
TTACATG	1625	38.068623	1
TATCAAC	49035	37.04675	2
ATCAACG	50940	35.63796	3
TCAACGC	51510	35.197403	4
CAACGCA	51690	35.074837	5
CACGATA	860	34.58204	7
AACGCAG	52875	34.31061	6
CTACACG	1130	33.68905	4
CTACACA	1450	33.228004	4