FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004898226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004898226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1564411
Sequences flagged as poor quality0
Sequence length150
%GC49

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT49430.31596556147968785No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27640.17667991339871683No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24390.15590532155552475No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT21320.1362813224913402No Hit
GCCCAGGAGAGGGCAGCTCTGAACTGCTGGCTGGGACCAGCTCAGTAGGA20710.13238209140692567No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18420.11774399438510723No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAT16790.10732473755298319No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)