EGAF00004912422 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912422
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1322612
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	2468	0.18660045425264554	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	2377	0.17972012956180647	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	2246	0.1698154863255437	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	2040	0.1542402458166114	No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTAT	1752	0.13246515228956035	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT	1701	0.12860914614414506	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC	1611	0.12180442941694163	No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC	1422	0.1075145242898144	No Hit
TCCCTACTCATAACCCCAGCACTTAGATATTTTAAAGAGGCATCTATCAC	1414	0.10690966058072965	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1402	0.10600236501710253	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1895	0.0	63.1827	1
GTATCAA	4090	0.0	55.926704	1
ATCAACG	5020	0.0	45.209805	3
CAACGCA	5095	0.0	44.310467	5
GACGTGT	55	8.493875E-4	43.308895	6
TATCAAC	5335	0.0	42.875397	2
ACGCAGA	5320	0.0	42.423588	7
CGCAGAG	5385	0.0	42.001423	8
AACGCAG	5440	0.0	41.81617	6
GCAGAGT	5565	0.0	40.653656	9
TCAACGC	5610	0.0	40.455116	4
AGAGTAC	5880	0.0	29.820423	10-11
CAGAGTA	5995	0.0	28.851124	10-11
GGTACCG	170	4.3932778E-7	28.023401	6
GTACTAG	345	0.0	27.625633	1
ATTTAGG	1295	0.0	27.138985	1
GTACTGG	720	0.0	26.474564	1
GAGTACG	6560	0.0	26.09296	12-13
AGTACGG	6735	0.0	25.76857	12-13
GTACACG	625	0.0	25.733276	4