FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004912431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004912431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1018
Sequences flagged as poor quality0
Sequence length125
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70.68762278978389No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA60.5893909626719057No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC40.3929273084479371No Hit
ATACCAAAGAATATCCCAATTATCCATAAAACTGTAACTAAGTGAGGCTC40.3929273084479371No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC30.29469548133595286No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA30.29469548133595286No Hit
TTATAATGATGCCTTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCT30.29469548133595286No Hit
ATATAAGCCTTGGTAGGGATAGATAGCCACCTATATAGTATAGCTTCCCA30.29469548133595286No Hit
GGTTTATACTTCAATATAAGCCTTGGTAGGGATAGATAGCCACCTATATA30.29469548133595286No Hit
GCTAAGACAGCTAAGAAAGCTCCAATTGGTAGAGTTCCAACATCTCCTGG30.29469548133595286No Hit
CTACTACTCCTTGTCATATTTCTTCCTGAATTGCTGATTCTTATTGGATT30.29469548133595286No Hit
GGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC30.29469548133595286No Hit
GGTTTTTCCAGGAGATGTTGGAACTCTACCAATTGGAGCTTTCTTAGCTG30.29469548133595286No Hit
TGCCTTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATG20.19646365422396855No Hit
GTGCTAGCCCGTCGAGACTGAAAAGCTATAACCCGCAGACCCGAGCGAAA20.19646365422396855No Hit
TAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCT20.19646365422396855No Hit
GGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCC20.19646365422396855No Hit
ATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATCCATAAAACT20.19646365422396855No Hit
GCATGATGGTGATTGTTTTGAAAACCATAGGAGGAAACCTCCTATTGGGA20.19646365422396855No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA20.19646365422396855No Hit
ATTAAAATCCCAACTATACCAAAGAATATCCCAATTATCCATAAAACTGT20.19646365422396855No Hit
CTCTCGTTCTCGCCCGCTTTGCAAAAATATCTAATATCAATTGCGTGCGG20.19646365422396855No Hit
CTACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA20.19646365422396855No Hit
GTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTTTTATGGATAATTG20.19646365422396855No Hit
GTTCCAACATCTCCTGGAAAAACCTTTGCTGGATATTTGTTAAATATCAA20.19646365422396855No Hit
GGTGCCACACGACTACAACCCTCGTAATAGGGCTGCGTGCGTCCTAAATA20.19646365422396855No Hit
TAATGATGCCTTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGG20.19646365422396855No Hit
GCCTCGAGAGGCCCCTTGCGGTCCATCGGGCGGCCGTGCGAGTCGACCAC20.19646365422396855No Hit
CCTGGGAACTGCATCTGATACTGGCAAGCTTGAGTCTCGTAGAGGGGGGT20.19646365422396855No Hit
GACCCCATTCTATACCAACACCTATTCTGATTTTTCGGTCACCCTGAAGT20.19646365422396855No Hit
CAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAG20.19646365422396855No Hit
CCTCTACGAGACTCAAGCTTGCCAGTATCAGATGCAGTTCCCAGGTTGAG20.19646365422396855No Hit
ACTCATAACCCCAGCACTTAGATATTTTAAAGAGGCATCTATCACATAAG20.19646365422396855No Hit
GGTATCAACGCAGAGTACGGGGGAATTCTGGACATTAATTAGGGCTGAAA20.19646365422396855No Hit
TTGGTATAGTTGGGATTTTAATATCATTAATAGCATGATGGTGATTGTTT20.19646365422396855No Hit
CCTCAAGGGCACAACCTCCAAGTCGACATCGTTTACGGCGTGGACTACCA20.19646365422396855No Hit
GTCCTAAATACACTCGCTGTTGAGATACTAAAATTATCTGTGGATTGCCG20.19646365422396855No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGAT20.19646365422396855No Hit
CAATCACCATCATGCTATTAATGATATTAAAATCCCAACTATACCAAAGA20.19646365422396855No Hit
CAATTATCCATAAAACTGTAACTAAGTGAGGCTCTCTCATTGGTTTATAC20.19646365422396855No Hit
GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGCGGGT20.19646365422396855No Hit
GTCTTAGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCA20.19646365422396855No Hit
CTCCTATGGTTTTCAAAACAATCACCATCATGCTATTAATGATATTAAAA20.19646365422396855No Hit
GTAACTAAGTGAGGCTCTCTCATTGGTTTATACTTCAATATAAGCCTTGG20.19646365422396855No Hit
CTTACACACCGGACGCTTGGATCAGTGGGAAGTGCTCACGCGCGGAGCCC20.19646365422396855No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.19646365422396855No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACT20.19646365422396855No Hit
GTTACAGTTTTATGGATAATTGGGATATTCTTTGGTATAGTTGGGATTTT20.19646365422396855No Hit
ATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGAGTAGG20.19646365422396855No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)