FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004912494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004912494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46733689
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT715330.15306516889775168No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC509950.10911828509835807No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)