EGAF00004912703 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912703
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	46806967
Sequences flagged as poor quality	0
Sequence length	20-48
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC	548554	1.171949466411699	No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC	542860	1.1597846106969503	No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC	245220	0.523896367820628	No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTAC	175533	0.3750146853138337	No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTAC	139634	0.2983188378772758	No Hit
AATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC	138071	0.2949795913928796	No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTC	132548	0.2831800659077099	No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTT	116917	0.2497854646296565	No Hit
AAAAAAAAAACCCCATTCTATACCAACACCTATTCTAATTTTTCAATC	95452	0.20392690686409995	No Hit
AATATCAAAAAAATACCTTAAATAACCTCTAAAACTCAAAAATAAAA	77646	0.16588556143789449	No Hit
AACTCTACCATCTTAACAAACCCTATTCTTAAATAAATATAAATATA	66010	0.14102601435380335	No Hit
AACAATAAACCATAACCAATACTACCAATCAATACTCATCATTAATA	61027	0.13038016327782997	No Hit
AAATAATCCAAATCAATTTCTATCTACTTCAAATTCCTCCCTATACA	53356	0.1139915773649679	No Hit
AAAAATTCCATTCCATTACATTCCATTACATTCCATTCCCCTACACTC	53279	0.11382707193995287	No Hit
ATAAAAATAACAATAATTATAATAACAAAAATAAAATATACTCATAT	52066	0.11123557738744319	No Hit
AATAACTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC	51600	0.11023999910098853	No Hit
AACGTAATAACGAACGCCTATAATCCCAACTACTTAAAAAACTAAAAC	48776	0.10420670922770964	No Hit
AAATAATAAATTACAATATAAAAAATTATTCCAAAACCTAATAAAAT	48130	0.10282657280485617	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACAGGC	25	1.1130232E-6	81.96257	42
TAGCGGT	150	0.0	79.230484	42
TTGAGGT	30	3.2889347E-6	68.30214	42
TACACTC	367075	0.0	65.00179	42
GCCGGAC	120	0.0	61.471924	42
TACAGTC	1635	0.0	57.90016	42
TACGAGC	95	0.0	56.079655	42
TGCACTC	2635	0.0	51.479332	42
TAGAGTC	40	1.8097488E-5	51.226604	42
TAGACTC	400	0.0	51.226604	42
CTGAGAC	40	1.8097488E-5	51.226604	42
TCCGCTT	7095	0.0	50.136368	42
TACACTT	40010	0.0	50.046124	42
GTAGCGG	145	0.0	47.063286	41
CGTCGGT	30	1.5916885E-6	47.063286	41
GCTCCTG	25	3.3836528E-5	46.081554	40
GTACAGT	255	0.0	45.217667	41
AGTAGCT	20	8.7570806E-4	43.044342	33
TAGTAGC	160	0.0	42.614822	39
TGCCGGA	100	0.0	42.356956	41