EGAF00004912705 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912705
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59347985
Sequences flagged as poor quality	0
Sequence length	20-48
%GC	31

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTAC	220557	0.3716335103879264	No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC	183345	0.3089321398190688	No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC	176601	0.2975686537630553	No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTAC	174139	0.2934202399626542	No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC	86411	0.1456005625127795	No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC	68568	0.11553551481149697	No Hit
AACGTAATAACGAACGCCTATAATCCCAACTACTTAAAAAACTAAAAC	67148	0.11314284722556292	No Hit
AAAAAAAAAACCCCATTCTATACCAACACCTATTCTAATTTTTCAATC	60910	0.10263195961918506	No Hit
AATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC	60825	0.10248873655946365	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCGGT	220	0.0	77.444084	42
CTGAGGC	30	1.9281742E-6	74.726746	42
GCCGGAC	225	0.0	73.73039	42
TTGAGGT	30	1.7318247E-4	59.7814	42
TCCGCTT	9905	0.0	59.07223	42
TACAGTC	780	0.0	57.482113	42
CTGAAGC	25	0.0063110283	53.80326	42
CCGAAAC	69150	0.0	45.23805	42
TCCAACC	130110	0.0	45.215107	42
TACACTC	207415	0.0	42.59549	42
TGCCGGA	210	0.0	42.200993	41
GTAGCGG	225	0.0	41.51665	41
CTGAGAC	120	3.6379788E-12	41.099712	42
GTTTCGA	920	0.0	39.833073	41
ATGCCGG	230	0.0	39.624847	40
CCGAAGC	200	0.0	38.11064	42
GCCATTC	91200	0.0	38.05793	8
TAGTAGC	240	0.0	37.40135	39
GGCTGAG	25	0.0017502981	37.389603	40
TACGAGC	60	1.1653702E-4	37.363373	42