EGAF00004912707 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912707
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	64875997
Sequences flagged as poor quality	0
Sequence length	20-48
%GC	29

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC	342392	0.5277637582972329	No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC	306249	0.4720528610912908	No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTAC	168535	0.2597802080791144	No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTAC	152023	0.23432857609879967	No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC	134455	0.20724922346858116	No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTC	68732	0.10594365123976437	No Hit
AATAATTCCATTCCATTAAATTCCATTCCATTCCATTCCCCTACACTT	64918	0.10006474351369121	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCGGT	175	0.0	68.099846	42
TACAGTC	1105	0.0	52.3845	42
CTGAGGC	35	4.7941314E-4	48.642746	42
GCCGGAC	140	0.0	48.642746	42
TGCACTC	1465	0.0	47.937176	42
TCCAACC	155225	0.0	47.408855	42
TCCGCTT	7690	0.0	47.156265	42
TACACTC	306835	0.0	47.02553	42
GTAGCGG	145	0.0	41.526253	41
GTACAGT	140	0.0	41.355125	41
GTTTCGA	1420	0.0	41.098843	41
AGTACAG	50	1.0168151E-9	40.7631	40
AGTGAGC	20	0.0011851556	40.476925	16
TAGTAGC	145	0.0	40.083324	39
CCGAAAC	70655	0.0	39.342587	42
GCCACTG	255	0.0	39.12659	32
GCCATTC	76455	0.0	38.35753	8
ATTCACG	82350	0.0	36.736588	2
TTCACGC	81140	0.0	36.673958	3
GCCATTG	35	9.32132E-6	36.391293	32