FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004912709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004912709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97864341
Sequences flagged as poor quality0
Sequence length20-48
%GC29

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC2940550.3004720585611464No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTAC2621470.26786774153008397No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTAC2292870.23429064933876168No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCGTATTAACC1740340.1778318826057389No Hit
AATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC1648390.16843622336352318No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC1609540.16446644237863922No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC1517710.15508304500819148No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC1309160.13377293369808724No Hit
ACTAATTTTTTATATTTTTAATAAAAACGAAATTTCACCTTATTAACC997640.10194111458840763No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)