FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004912713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004912713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61761298
Sequences flagged as poor quality0
Sequence length20-48
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTAC2091210.33859553923235225No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTAC1833170.2968153292374134No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC1276100.20661806686770087No Hit
AATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC1078470.17461906321981768No Hit
AACGTAATAACGAACGCCTATAATCCCAACTACTTAAAAAACTAAAAC633880.10263385332348422No Hit
AAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC627510.10160246308294882No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC622760.10083337302917435No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)