FastQCFastQC Report
Wed 11 May 2022
EGAF00004912715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004912715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86608496
Sequences flagged as poor quality0
Sequence length20-48
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTAC2884680.33307124973051144No Hit
AATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTAC2290120.2644220954951117No Hit
AAAAAAAAAACCCCATTCTATACCAACACCTATTCTAATTTTTCAATC2044250.23603342563528643No Hit
AACAATAAACCATAACCAATACTACCAATCAATACTCATCATTAATA1976170.22817276494444608No Hit
AAATAATCCAAATCAATTTCTATCTACTTCAAATTCCTCCCTATACA1602840.18506729409087072No Hit
AATATCAAAAAAATACCTTAAATAACTTCTAAAACTCAAAAATAAAA1571780.18148104084384514No Hit
AATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC1295690.1496031059123807No Hit
AATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC1212450.13999203958004305No Hit
AAATAATAAATTACAATATAAAAAATTATTCCAAAACCTAATAAAAT1168130.13487475870727508No Hit
AACTCTACCATCTTAACAAACCCTATTCTTAAATAAATATAAATATA1147630.13250778537939278No Hit
ATAAAAATAACAATAATTATAATAACAAAAATAAAATATACTCATAT1029180.11883129802877537No Hit
AACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC894520.1032831698174276No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)