FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004912728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004912728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1656455
Sequences flagged as poor quality0
Sequence length125
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT66300.40025234612470606No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50520.3049886655538484No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT45460.27444150308942894No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)