EGAF00004912979 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912979
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6423501
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	21265	0.331049999058146	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	19892	0.3096753623919417	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	14032	0.2184478526585424	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	11434	0.17800261882110704	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	11253	0.1751848407900925	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10794	0.16803920478879042	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	10401	0.16192104585957096	No Hit
TCTTTATCACCAGAATGAGGAACTCCTGGAAGTTAACTGCACCATCAGTG	10181	0.15849612228596213	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	8982	0.1398302888097939	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	8734	0.1359694658722712	No Hit
GTTCTTAGGTAGCTCGTCTGGTTTCGGGGGTCTTAGCTTTGGCTCTCCTT	8031	0.1250252782711484	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	7928	0.12342179132532245	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	7822	0.12177160087622	No Hit
GAGCTGTTCCTCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAGAGG	7822	0.12177160087622	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	7451	0.11599593430436145	No Hit
GTACGGGGCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAA	7399	0.1151864069142357	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA	7231	0.1125710107307526	No Hit
CCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAG	6489	0.10101967758703548	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGTCGG	690	50.846207	1
GCTCTAG	540	47.351128	1
CGGGGAC	970	45.984653	4
ACCAGAA	3205	44.8937	9
GCCCGTT	1135	44.013214	3
GTATCAA	20275	43.436	1
CCCGTTG	1165	42.371666	4
TTTATCA	3590	41.57947	3
GGTATCA	10260	39.758717	1
AGTCGGG	900	38.325264	2
ATCAACG	22310	38.278465	3
TCTTTAT	3840	38.249115	1
CAACGCA	22510	37.914017	5
ACGGGAC	2960	37.771637	3
ACGGGTC	1040	37.740726	3
TCTGTCG	520	37.734547	8
TCAACGC	22660	37.636795	4
AACGCAG	23330	36.73122	6
GTACAAA	1130	36.31	1
ACGCAGA	23710	36.217773	7