EGAF00004912981 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912981
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6425003
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	21202	0.3299920638169352	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	19392	0.3018208707451187	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	13779	0.21445904383235306	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	11236	0.1748792957762043	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	11169	0.17383649470669507	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10808	0.1682178202873991	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	10179	0.15842794159006618	No Hit
TCTTTATCACCAGAATGAGGAACTCCTGGAAGTTAACTGCACCATCAGTG	9941	0.15472366316404831	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	8908	0.13864584965952545	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	8801	0.13698048078732414	No Hit
GTTCTTAGGTAGCTCGTCTGGTTTCGGGGGTCTTAGCTTTGGCTCTCCTT	8161	0.1270193959442509	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	7945	0.1236575298097137	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	7908	0.12308165459222353	No Hit
GAGCTGTTCCTCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAGAGG	7824	0.12177426220657019	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	7488	0.11654469266395673	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA	7408	0.11529955705857257	No Hit
GTACGGGGCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAA	7179	0.11173535638816043	No Hit
CCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAG	6458	0.10051357174463577	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGTCGG	630	46.252396	1
ACCAGAA	3185	44.417076	9
GTATCAA	18940	44.05106	1
GGTATCA	9565	41.7173	1
GCTCTAG	555	40.71639	1
TTTATCA	3745	39.2288	3
CCCGTTG	1170	39.143047	4
GCCCGTT	1215	38.18372	3
ATCAACG	21270	38.0584	3
CAACGCA	21755	37.209072	5
CGGGGAC	1055	37.20842	4
TCAACGC	21685	37.192043	4
ACGGGAC	3060	37.12546	3
CGGGTAT	360	36.347115	4
TCTGTCG	530	35.88916	8
AACGCAG	22500	35.77331	6
AGTCGGG	790	35.385384	2
ACGCAGA	23070	34.99252	7
CGCAGAG	23150	34.89455	8
TCTTTAT	4170	34.79625	1