EGAF00004912983 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912983
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6490449
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	23272	0.3585576282935125	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	20421	0.3146315455217351	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	13998	0.2156707494350545	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	11053	0.17029638473393752	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	10776	0.16602857521875605	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	10475	0.16139099159395598	No Hit
ACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAA	10129	0.15606008151362102	No Hit
TCTTTATCACCAGAATGAGGAACTCCTGGAAGTTAACTGCACCATCAGTG	9712	0.14963525635899766	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	8805	0.13566087646632768	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	8491	0.13082299853215085	No Hit
GTTCTTAGGTAGCTCGTCTGGTTTCGGGGGTCTTAGCTTTGGCTCTCCTT	7915	0.1219484199013042	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	7641	0.11772683214982507	No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT	7625	0.117480316076746	No Hit
GAGCTGTTCCTCTTTGGACTAACAGTTAAATTTACAAGGGGATTTAGAGG	7490	0.11540033671014131	No Hit
GTACGGGGCTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAA	7366	0.11348983714377849	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	7240	0.1115485230682808	No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA	7109	0.10953017271994588	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGTCGG	740	48.108883	1
GCTCTAG	550	46.388626	1
GGTATCA	8985	45.367455	1
GTATCAA	18700	44.77042	1
ACCAGAA	3180	44.22254	9
ACGGGAC	2915	42.338345	3
GCCCGTT	1195	41.211582	3
CGGGGAC	960	40.793896	4
CCCGTTG	1225	40.68794	4
GTCTCGC	550	39.915794	1
ATCAACG	20650	39.364944	3
CGGGACC	740	39.290436	4
AGTCGGG	895	39.114525	2
CAACGCA	21105	38.686455	5
TCAACGC	21175	38.334095	4
AACGCAG	21850	37.638382	6
TTTATCA	3825	37.229645	3
ACGCAGA	22370	36.84275	7
CGCAGAG	22370	36.84275	8
GCAGAGT	23280	35.428627	9