EGAF00004912988 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912988
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7478033
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	52849	0.7067232787017655	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36522	0.4883904631070764	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26687	0.35687192073102647	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17524	0.2343396986881443	No Hit
GTCCCAACCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG	14610	0.19537223224342554	No Hit
GTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGG	10725	0.143420067817299	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCCCAA	5970	55.227566	1
GTATCAA	33695	52.517437	1
GGTATCA	22550	52.033566	1
CCAACCA	7290	44.968113	4
CCAGGAC	7600	43.52123	8
TCCCAAC	7660	43.495052	2
CAACGCA	43455	40.988377	5
TCAACGC	43920	40.598038	4
AACGCAG	44215	40.511757	6
ATCAACG	44010	40.487976	3
TATCAAC	44500	40.028786	2
GTCTCGC	2145	39.191956	1
ACGCAGA	47270	37.918705	7
TCTGTCG	2670	37.87718	8
CGCAGAG	47715	37.614937	8
GCAGAGT	50425	35.758556	9
ACCAGGA	9385	35.560555	7
TCTCGCT	2470	33.962746	2
CTCGCTC	2340	31.781525	3
CTGTCGC	3140	31.26038	9