FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004912989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004912989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7478033
Sequences flagged as poor quality0
Sequence length125
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA186580.24950411425036503No Hit
GTCCCAACCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGG152260.20360969254882935No Hit
GTCCCAACCAGGACACAGCATGGACATGAGGGTCCCTGCTCAGCTCCTGG106400.14228340527515723No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)