EGAF00004912990 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912990
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9227036
Sequences flagged as poor quality	0
Sequence length	125
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54084	0.5861470574082511	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36467	0.3952190064068245	No Hit
GGGCCCGTTGGGAGGCCCAAGGGGCAAGAAGCATGGCCACCGAGGCTCCA	27650	0.29966286031614053	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26606	0.2883482843244569	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22878	0.24794527733499683	No Hit
GTGTGGCAAAGGTGCCCTTGAGGTTGTCCAGGTGAGCCAGGCCATCACTA	13935	0.15102357896945454	No Hit
GGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCGAGGCTCCA	12766	0.13835428841937975	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	10545	0.11428372014588434	No Hit
GCACCCTTTTTCCTGATATACTGAGGACACTCGGTCTCTAGCAATTTCTT	9450	0.10241642061437714	No Hit
TCATAATATCCCCCAGTTTAGTAGTTGGACTTAGGGAACAAAGGAACCTT	9333	0.10114840778772294	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	19120	68.43059	1
GGCCCGT	9935	64.13769	2
GCCCGTT	9955	63.948376	3
CCCGTTG	10125	62.9922	4
GGGCCCG	9080	58.90969	1
GTATCAA	38985	53.98218	1
GTTGGGA	13990	45.759033	7
CGTTGGG	14030	45.586166	6
TCTGTCG	2980	43.5203	8
CCGTTGG	14900	42.8051	5
ATCAACG	51365	42.43998	3
AAGTACG	790	42.17682	1
CAACGCA	51915	41.94452	5
TCAACGC	52095	41.845276	4
CCACCGA	6615	41.326042	36-37
GTCTCGC	2545	41.146965	1
AACGCAG	53155	41.1111	6
TATCAAC	53970	40.303753	2
TCTCGCT	2780	38.736954	2
CGCAGAG	57720	37.898235	8