EGAF00004912995 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912995
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9182673
Sequences flagged as poor quality	0
Sequence length	125
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20203	0.22001219035023897	No Hit
GGGCCCGTTGGGAGGCCCAAGGGGCAAGAAGCATGGCCACCGAGGCTCCA	19419	0.21147437135134836	No Hit
TCTTTATCACCAGAATGAGGAACTCCTGGAAGTTAACTGCACCATCAGTG	15142	0.16489751949132894	No Hit
GTGTGGCAAAGGTGCCCTTGAGGTTGTCCAGGTGAGCCAGGCCATCACTA	12305	0.13400237599661885	No Hit
GGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCGAGGCTCCA	11649	0.12685848663020016	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	10658	0.11606642205379632	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCCGTT	7630	57.528008	3
CCCGTTG	7780	56.877853	4
GGCCCGT	7920	55.345848	2
GGGCCCG	8175	54.55991	1
GTATCAA	21465	49.620922	1
GGTATCA	10965	49.084015	1
GTCTCGC	3010	44.849697	1
TCTCGCT	3155	42.60414	2
TCTGTCG	3145	42.532875	8
CGTTGGG	10415	42.071926	6
CAACGCA	26055	39.87968	5
ATCAACG	26260	39.817284	3
AACGCAG	26595	39.211525	6
GTTGGGA	11220	39.16023	7
TCAACGC	26720	39.10976	4
CTCGCTC	3255	38.00667	3
CGCAGAG	27475	37.99703	8
ACGCAGA	27995	37.3576	7
TTATCAC	5885	37.091076	4
CCGTTGG	11920	37.073402	5