EGAF00004912998 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004912998
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4815637
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35221	0.7313881839515727	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21818	0.4530657107252893	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14387	0.29875590705860927	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11980	0.24877290377160904	No Hit
GTACAGGAGTAATAGCAATTCCCTGTAGCTCTCAAAGCAAATTTTGAGCT	4979	0.10339234456417709	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	11030	60.693634	1
GTATCAA	21315	55.30511	1
GTCTCGC	2595	51.366123	1
TCTGTCG	2795	48.10337	8
CTCGCTC	2605	46.595932	3
TCTCGCT	2800	45.901382	2
TATCAAC	26680	44.202606	2
CAACGCA	26645	44.01457	5
ATCAACG	26940	43.885983	3
TCAACGC	27070	43.54334	4
AACGCAG	27115	43.42629	6
TCGCTCT	3065	41.932312	4
ACGCAGA	28860	40.75931	7
CGCAGAG	29155	40.401825	8
CGCTCTG	2820	40.089443	5
CTGTCGC	3570	38.327324	9
GCAGAGT	31140	37.826443	9
GTACTTT	35305	35.98552	1
GTCTCAC	4610	35.62659	1
CCCGTTG	1225	34.486397	4