EGAF00004913008 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913008
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7688421
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	44205	0.5749555077694106	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31620	0.41126780128195367	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25236	0.32823384671573	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21446	0.27893893947795	No Hit
ATATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14757	0.19193798050340896	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	13603	0.17692839661095563	No Hit
AGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11054	0.14377464501488668	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10294	0.13388965042366957	No Hit
ATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9887	0.12859597568863618	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8726	0.113495345793369	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	12440	72.51177	1
AAGTACG	1180	66.05702	1
ACTGCCT	7500	49.505455	1
TCTGTCG	2720	48.997932	8
ACTGCCC	7775	48.519753	1
GTATCAA	28785	47.81224	1
ATCAACG	38590	44.761227	3
TCAACGC	39200	44.078434	4
CAACGCA	40305	42.92903	5
ATACTTT	13920	42.745506	1
ACTGCAT	4825	42.42197	1
AACGCAG	41765	41.569447	6
ACTGCCG	755	40.981335	1
ATACGGG	5945	40.835514	1
TCTCGCT	3150	40.801197	2
CGCTCTG	2920	40.345764	5
TATCAAC	43945	39.198444	2
ACGCAGA	45245	38.27985	7
CGCAGAG	45445	38.12448	8
GTCTCGC	2660	37.356358	1