EGAF00004913010 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913010
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7632446
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	41287	0.5409406106508975	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29617	0.3880407408057653	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24115	0.31595375846746904	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20145	0.2639389784087565	No Hit
ATATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16057	0.21037816710396642	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	13438	0.17606413461687118	No Hit
AGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12262	0.16065622999494525	No Hit
ATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10716	0.1404006002793862	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10011	0.13116371868205814	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9085	0.11903130398826275	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	12000	69.324745	1
AAGTACG	1290	65.964264	1
ACTGCCT	7480	50.357536	1
TCTGTCG	2900	49.648785	8
ACTGCCC	7935	47.544987	1
ACTGCCG	815	46.728813	1
GTATCAA	27765	46.59338	1
ATCAACG	37565	44.53956	3
ATACGGG	6160	44.339863	1
TCAACGC	38120	43.984745	4
CAACGCA	38955	43.05693	5
ATACTTT	13390	42.7076	1
ACTGCAT	4910	41.81191	1
AACGCAG	40395	41.68214	6
TATAACG	310	40.30618	2
TATCAAC	42560	39.382133	2
ACGCAGA	43895	38.345036	7
CGCAGAG	44070	38.24677	8
TGGTATC	4895	37.559498	2
TCTCGCT	3165	37.41049	2