EGAF00004913014 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913014
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12198087
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	74799	0.6132027095724109	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	51386	0.42126277669605083	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45198	0.37053351070540813	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42934	0.3519732233423159	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	20938	0.17164986608146016	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18159	0.14886760522367157	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12362	0.1013437598862838	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	12299	0.10082728545877727	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	20950	64.01163	1
AAGTACG	950	62.00127	1
GTATCAA	43720	50.10633	1
TCTGTCG	5000	49.25899	8
ATCAACG	56145	40.933556	3
TCAACGC	56865	40.41527	4
GTCTCGC	4865	40.234818	1
CAACGCA	57285	40.108574	5
ACGGGAC	2635	39.737255	3
TCTCGCT	5430	39.662	2
CTCGCTC	4945	39.581795	3
GTACTTT	91660	39.017178	1
AACGCAG	59800	38.620388	6
CGCTCTG	4970	37.108307	5
ACTTTTT	108210	35.862938	3
ACGCAGA	64470	35.832077	7
CGCAGAG	64705	35.738132	8
TATCAAC	64855	35.417847	2
GTACGGG	40235	35.370903	1
GGCTAGA	4460	35.084064	1