EGAF00004913123 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913123
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4956612
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	7716	0.1556708493624274	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	7638	0.15409719380899695	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	7330	0.14788327188006647	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	6620	0.13355897132960984	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	6364	0.12839415310296629	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	6075	0.12256355752679451	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	6066	0.12238198188601408	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	5498	0.11092254144564877	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	5335	0.10763400484040309	No Hit
CTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAG	4990	0.10067360527715302	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCAGCGC	655	47.20263	8
CAACGCA	2930	44.44741	5
GTATCAA	3200	43.10731	1
CGCAGAG	3125	41.85784	8
ACGCAGA	3160	41.58616	7
TCAACGC	3290	39.403114	4
ATCAACG	3315	39.10556	3
TGCAGCG	840	36.81016	7
AACGCAG	3660	36.393127	6
TGGTCCT	2370	35.37861	5
GACGACC	790	34.285534	118-119
GCAGAGT	4240	31.129297	9
GCTCTAG	995	29.878574	1
CTAGCCT	4150	28.80169	4
GAGTACG	3880	28.656475	1
GCCTTTC	3685	27.91594	7
GGTATCA	1765	27.623714	1
TACGGGT	880	26.354324	4
GTCGTGC	385	26.254341	1
TCTGTCG	510	25.648186	8