EGAF00004913169 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913169
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18935244
Sequences flagged as poor quality	0
Sequence length	101
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	57102	0.30156463787844506	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	51758	0.2733421338536752	No Hit
GGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCA	39784	0.21010555765745612	No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG	38850	0.20517295684174972	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA	32717	0.17278361979386164	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	31927	0.1686115056135532	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	30038	0.15863539968114485	No Hit
TTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGG	27869	0.14718056973546262	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	26709	0.14105442739475657	No Hit
CAACCTATTCTCAAACTTTAAATGGGTAAGAAGCCCGGCTCGCTGGCGTG	25159	0.13286863374984764	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	24826	0.13111000840548978	No Hit
TGATTTTCAGTACGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTC	24168	0.1276350069742962	No Hit
TGGTGCTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	22905	0.12096490544299297	No Hit
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	20095	0.10612485373835162	No Hit
GGGCCAGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGA	19389	0.10239635676202534	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTCCGAC	13305	52.73262	8
GTAGCAA	50340	52.707767	9
AATACCG	5525	51.738937	8
AGTAGCA	53055	49.92118	8
GTACGGT	2790	48.634686	2
GATAGTA	8235	46.705242	5
CAGTACG	14455	46.70081	8
TCCGACC	15145	46.326015	9
TAGTAGC	57220	46.28746	7
AGTACGA	14635	46.061638	9
TTTCCGA	15390	45.834953	7
GCTAGTA	5445	44.942806	5
ATAGTAG	10255	44.794083	6
GGTGTTA	8425	44.375225	2
CGGTGAA	16565	42.94456	5
ATACCGG	6660	42.850388	9
CCGTTTC	13640	42.488907	4
CGTTTCC	14010	42.212074	5
CGACCTA	1465	42.10077	1
TCACCCC	43670	41.847904	9