EGAF00004913196 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913196
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20446972
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	97184	0.47529776047035227	No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	81024	0.39626405318107744	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	48368	0.23655336350047332	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT	42489	0.20780093991423276	No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT	34504	0.16874870274190235	No Hit
GAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTAT	25829	0.12632188277071052	No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA	23765	0.11622747857237736	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	21487	0.10508646463642636	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	11505	72.576294	4
GCGACAT	11925	70.310814	5
CTGCGAC	12750	65.60103	3
GCTGCGA	13570	61.776928	2
GGCTGCG	17045	50.098648	1
CGACATC	17580	47.774834	6
ACTCGGG	22195	38.174305	1
ACATCTG	23705	35.811325	8
CTCGGGA	23990	35.399628	2
ACCCGAC	6210	34.34126	3
GACATCT	25040	33.864113	7
TCGGGAG	25935	32.76314	3
CATCTGT	26290	32.21793	9
CCCGACT	6765	31.73461	4
CCGACTC	6995	30.696335	5
TGGCTAG	37665	28.146133	4
CGACTCC	7570	28.113695	6
TTGATCG	15115	28.061722	22-23
CTAGGCG	37670	27.806656	7
TGATCGC	15500	27.103638	24-25