EGAF00004913200 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913200
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10438197
Sequences flagged as poor quality	0
Sequence length	101
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	131812	1.2627851342525915	No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	127997	1.2262366766980926	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	50751	0.48620465775842325	No Hit
GGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGG	35367	0.33882288291742335	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	33683	0.3226898285211517	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	26545	0.25430637110987653	No Hit
CCATCACGAATGGGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTA	25212	0.2415359664125902	No Hit
AGCCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCCGGCTTGCCGAC	22453	0.21510419855076507	No Hit
CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACC	19280	0.1847062284798802	No Hit
CCCCACCTGGCACTGTCCCCGGAGCGGGTCGCGCCCGGCCGGCGCGCGGC	18704	0.17918803410205805	No Hit
CCGCCACTCCGGATTCGGGGATCTGAACCCGACTCCCTTTCGATCGGCCG	16976	0.1626334509685916	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGT	16796	0.16090901522552217	No Hit
GCCATGTATTCCAGAAAGGCCATGTACAAGAGGAAGTACTCAGCCGCTAA	16125	0.15448070198330227	No Hit
CCCCCCCACCCCCACCACCACGCCCGCGGTCGGCGGGAGAGGCCGGGAGG	12809	0.12271276351653451	No Hit
GAGTAGTGGTATTTCACCGGCGGCCCGCAGGGCCGGCGGACCCCGCCCCG	12593	0.1206434406248512	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	12481	0.11957045838471912	No Hit
CCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGA	12225	0.11711792755013149	No Hit
AGAAGCAGGTCGTCTACGAATGGTTTAGCGCCAGGTTCCCCACGAACGTG	10980	0.10519058032723468	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCGACA	15815	85.172935	4
GCGACAT	16095	83.72072	5
CTGCGAC	16875	79.86473	3
GCTGCGA	17435	77.306564	2
CGACATC	18770	71.8399	6
GGCTGCG	19575	69.08554	1
ACATCTG	21010	64.20323	8
CATCTGT	22760	59.517113	9
CACGAAT	4455	56.61238	5
GACATCT	24565	55.047207	7
TCACGAA	4920	50.199894	4
CATCACG	5270	47.14874	2
CGCACTA	7070	46.489113	7
ATCACGA	5465	45.37533	3
GTCCGCA	7645	42.806168	4
TCCGCAC	8210	40.033867	5
TTGATCG	17515	38.469086	22-23
TGATCGC	17525	38.447414	24-25
GCACTAA	8595	38.406395	8
CTAGGCG	34280	37.257576	7