EGAF00004913201 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913201
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10438197
Sequences flagged as poor quality	0
Sequence length	101
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCTATCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	31496	0.3017379342428582	No Hit
GGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGA	23129	0.221580412785848	No Hit
TGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	23073	0.22104392166578196	No Hit
CCTCTGTCGGGGATGGTCGTCCTCTTCGACCGAGCGCGCAGCTTCGGGAG	17706	0.16962699592659536	No Hit
GCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAA	14699	0.14081933881876343	No Hit
GGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGA	12546	0.12019317129193863	No Hit
TGGTGTTAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	12140	0.11630361067145985	No Hit
TGGTGATAGTAGCAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAG	11924	0.11423428777977652	No Hit
GGCACGGTGAAGAGACATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGGC	11178	0.10708745964461104	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTCGGG	3840	54.227173	5
TCTGTCG	4100	49.391727	3
GTAGCAA	24605	47.632107	9
TAGTAGC	25095	46.56943	7
CTGTCGG	4440	46.15355	4
AGTAGCA	26320	44.44375	8
TTCCGAC	4145	41.95625	8
GTACGGT	1385	41.13499	2
TCGGGGA	22305	40.77477	7
TCCGACC	4300	40.017178	9
CGGGGAT	22700	39.863018	8
CAGTACG	5540	38.622547	8
GCTAGTA	2580	37.981274	5
CGGTGAA	8330	37.38371	5
GATAGTA	4655	37.345013	5
ATAGTAG	5805	36.92571	6
AGTACGA	5855	36.63587	9
CGACCTA	675	36.267803	1
GTAGTAG	19900	35.936714	6
GGTGTTA	4010	35.92964	2