FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004913238

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913238
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16022944
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG179020.11172728307606891No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC168640.1052490728295624No Hit
CAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGG167810.10473106565185525No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)