FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004913240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004913240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11458176
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC187830.16392661449780488No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC176660.1541781170057084No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC150300.1311727102114682No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)