EGAF00004913316 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913316
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9227232
Sequences flagged as poor quality	0
Sequence length	101
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC	39816	0.43150535285121255	No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC	38643	0.41879298147049954	No Hit
GGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGG	32098	0.3478616339114482	No Hit
AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG	21799	0.23624636293961182	No Hit
CTCAGGACCGACTGACCCATGTTCAACTGCTGTTCACATGGAAGCCTTCT	17797	0.19287474293482595	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG	16126	0.1747653033975953	No Hit
CCTCGACCGCTCGCGTCGCATTTGGCCGCCTCCCTACCGCTCCAAGCCCA	12485	0.13530601593197178	No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC	10064	0.10906846170119057	No Hit
GCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCC	9816	0.10638076510918984	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGACAT	5640	67.28714	5
TGCGACA	5640	67.11871	4
CTGCGAC	6680	56.963688	3
GCTGCGA	6735	56.64449	2
TCGACCG	2475	52.207844	3
CGACATC	8000	47.734287	6
GCTCGCG	2850	45.33028	9
CTCGACC	2895	44.80163	2
GGCTGCG	8845	43.67083	1
CCTCGAC	3200	40.285854	1
GCGCGGT	4495	37.08872	6
ACATCTG	10285	36.80598	8
CGCACTA	8755	35.968452	7
GTCCGCA	8895	35.24215	4
CATCTGT	11610	32.973663	9
TCCGCAC	9550	32.67581	5
CTCGCGT	2020	32.21318	10-11
GACATCT	12120	31.54697	7
GCACTAA	10100	31.413727	8
TGTCCGC	9985	31.35302	3