EGAF00004913319 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004913319
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7456546
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	19862	0.2663699788078824	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	14753	0.19785300057157834	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	12681	0.17006533588071476	No Hit
GTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCC	12627	0.16934113998626174	No Hit
GGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAG	10458	0.14025260489239924	No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG	9311	0.12487014765281405	No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG	9249	0.12403866347770133	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	9056	0.12145033370678596	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	8775	0.11768183284861383	No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC	8719	0.11693081488399588	No Hit
CCTCTAGAGGGATATGAAGCACCGCCAGGTCCTTTGAGTTTTAAGCTGTG	8029	0.10767720067709635	No Hit
CTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAG	7857	0.10537050264291267	No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC	7850	0.10527662539733544	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	7828	0.10498158262552126	No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA	7619	0.10217867629328647	No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG	7544	0.10117284866210173	No Hit
ATGCTAGGGTGAGTGGTAGGAAGTTTTTTCATAGGAGGTGTATGAGTTGG	7493	0.10048888587289612	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	7469	0.10016702103091699	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	2165	53.911854	1
GCAGCGC	1420	52.369904	8
TGCAGCG	1475	50.01211	7
CAACGCA	5790	46.475113	5
CGCAGAG	6210	43.397697	8
ACGCAGA	6230	43.256927	7
TGGTCCT	3270	42.965992	5
ATCAACG	6300	42.901836	3
TCAACGC	6350	42.470276	4
GTATCAA	7140	40.451035	1
GCAGAGT	6845	39.286434	9
CATGCAG	2055	37.950726	5
GCTCTAG	1915	37.627266	1
AACGCAG	7445	36.275494	6
TCCAGTA	1805	33.642136	2
CCAGTAC	1965	33.32658	3
GCCTTTC	4965	33.18991	7
GTACACT	1910	32.702286	6
CTAGCCT	7180	31.34209	4
CTTTCTA	5535	29.98915	9